Blog
Secure Common Open Repositories
CancerCommons and PatientsLikeMe are two organizations which will take your patient data and make it available for research. In addition, below is a list of companies which will purportedly store and rent out your clinical and genomic data, and then give you a cut of the proceeds. Others are starting up.
2018 Kidney Cancer Hackathon: Continuing Projects
Some teams have said that they would like to continue their projects. Below is the list I have heard about plus team leads.
2018 Kidney Cancer Hackathon Results: Bill's p1RCC Genes
This cross references Alex Feltus and James Hsieh's work with Genes of interest from the Teams.
2018 Kidney Cancer Hackathon: Kidney Cancer Genes
Thanks to Alex Feltus for this curated list from James and his own work. Both James and Alex produced this list using data from TCGA.2018 Kidney Cancer Hackathon: Day 3 20180520
Presentations plus code referenced here:
Team
2018 Kidney Cancer Hackathon: Day 2 20180519
9.15: Talks (Optional)
9.15: Track 1 - Clayton Mellina: Crash Course in Google Cloud. - pdf
10.00 Talks (Optional)
2018 Kidney Cancer Hackathon: Day 1 20180518
Below are the presentations given tonight:
18.45: Ben Busby, PhD: Welcome, Intro & Bioinformatics Overview. - pdf
19.00: Steven Tamm, Salesforce Welcome
19.05: Pete Kane: SVAI Welcome.
2018 Kidney Cancer Hackathon: Data
We have a set of TCGA pan cancer data created by Clemson (Note 1), as well as sequenced blood and tumor data (Note 2), which has been processed by Sean Davis (Note3). These data sets are available in Google cloud as well as on 4 disks.
2018 Kidney Cancer Hackathon: Bibliography
Readings
